RubyGems - complearn - Versions diffs - 0.6.2 - Mend

complearn 0.6.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (104) hide show

data/AUTHORS +13 -0
data/COPYING +340 -0
data/ChangeLog +0 -0
data/INSTALL +231 -0
data/Makefile +352 -0
data/Makefile.am +76 -0
data/Makefile.in +352 -0
data/NEWS +7 -0
data/README +0 -0
data/aclocal.m4 +104 -0
data/bin/Makefile +209 -0
data/bin/Makefile.am +8 -0
data/bin/Makefile.in +209 -0
data/bin/labeltree +68 -0
data/bin/labeltree.in +68 -0
data/bin/makesvm +70 -0
data/bin/makesvm.in +70 -0
data/bin/maketree +98 -0
data/bin/maketree.in +98 -0
data/bin/ncd +43 -0
data/bin/ncd.in +43 -0
data/bin/ncdmatrix +54 -0
data/bin/ncdmatrix.in +54 -0
data/bin/ncdvector +50 -0
data/bin/ncdvector.in +50 -0
data/complearn-0.6.2.gem +0 -0
data/complearn.gemspec +57 -0
data/config.log +597 -0
data/config.status +1082 -0
data/configure +4922 -0
data/configure.ac +91 -0
data/confstat5FpLBf/config.h +65 -0
data/confstat5FpLBf/subs-1.sed +50 -0
data/confstat5FpLBf/subs-2.sed +13 -0
data/confstat5FpLBf/subs.frag +0 -0
data/confstat5FpLBf/subs.sed +59 -0
data/confstat5FpLBf/undefs.sed +24 -0
data/doc/FAQ.txt +67 -0
data/doc/Makefile +286 -0
data/doc/Makefile.am +11 -0
data/doc/Makefile.in +286 -0
data/doc/devguide.txt +15 -0
data/doc/example.complearnrc +14 -0
data/doc/examples.txt +35 -0
data/doc/man/Makefile +255 -0
data/doc/man/Makefile.am +11 -0
data/doc/man/Makefile.in +255 -0
data/doc/man/complearn.5 +91 -0
data/doc/man/labeltree.1 +35 -0
data/doc/man/makesvm.1 +60 -0
data/doc/man/maketree.1 +58 -0
data/doc/man/ncd.1 +51 -0
data/doc/man/ncdmatrix.1 +40 -0
data/doc/man/ncdvector.1 +42 -0
data/doc/readme.txt +101 -0
data/doc/userguide.txt +46 -0
data/examples/genes/blueWhale.txt +1 -0
data/examples/genes/cat.txt +1 -0
data/examples/genes/chimpanzee.txt +1 -0
data/examples/genes/finWhale.txt +1 -0
data/examples/genes/graySeal.txt +1 -0
data/examples/genes/harborSeal.txt +1 -0
data/examples/genes/horse.txt +1 -0
data/examples/genes/human.txt +1 -0
data/examples/genes/mouse.txt +1 -0
data/examples/genes/rat.txt +1 -0
data/ext/Makefile +167 -0
data/ext/Quartet.c +399 -0
data/ext/Quartet.h +62 -0
data/ext/TreeScore.c +244 -0
data/ext/TreeScore.h +3 -0
data/ext/config.h +65 -0
data/ext/config.h.in +64 -0
data/ext/extconf.rb +3 -0
data/ext/lib/CompLearnLib/CLConfig.rb +241 -0
data/ext/lib/CompLearnLib/CompressionObject.rb +59 -0
data/ext/lib/CompLearnLib/CompressionTask.rb +99 -0
data/ext/lib/CompLearnLib/DistMatrix.rb +18 -0
data/ext/lib/CompLearnLib/FoundComp.rb +10 -0
data/ext/lib/CompLearnLib/FoundComp.rb.in +10 -0
data/ext/lib/CompLearnLib/Ncd.rb +248 -0
data/ext/lib/CompLearnLib/RunEnv.rb +150 -0
data/ext/lib/CompLearnLib/Task.rb +39 -0
data/ext/lib/CompLearnLib/TaskMaster.rb +13 -0
data/ext/lib/CompLearnLib/TaskMasterMPI.rb +112 -0
data/ext/lib/CompLearnLib/TaskMasterSingle.rb +39 -0
data/ext/lib/CompLearnLib/Tree.rb +300 -0
data/install-sh +294 -0
data/missing +336 -0
data/mkinstalldirs +111 -0
data/o +24 -0
data/scripts/CompLearn.iss +89 -0
data/scripts/CompLearn.iss.in +89 -0
data/scripts/debian/changelog +6 -0
data/scripts/debian/control +14 -0
data/scripts/makeSetup.sh +23 -0
data/scripts/makeSetup.sh.in +23 -0
data/scripts/makedeb.zsh +46 -0
data/scripts/makedeb.zsh.in +46 -0
data/tests/alltests.rb +2 -0
data/tests/bz2test.rb +516 -0
data/tests/sshagent-test.rb +48 -0
data/tests/tests.rb +275 -0
metadata +164 -0

data/config.status ADDED

@@ -0,0 +1,1082 @@
+#! /bin/sh
+# Generated by configure.
+# Run this file to recreate the current configuration.
+# Compiler output produced by configure, useful for debugging
+# configure, is in config.log if it exists.
+debug=false
+ac_cs_recheck=false
+ac_cs_silent=false
+SHELL=${CONFIG_SHELL-/bin/sh}
+## --------------------- ##
+## M4sh Initialization.  ##
+## --------------------- ##
+# Be Bourne compatible
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+  emulate sh
+  NULLCMD=:
+  # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
+  # is contrary to our usage.  Disable this feature.
+  alias -g '${1+"$@"}'='"$@"'
+elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
+  set -o posix
+fi
+DUALCASE=1; export DUALCASE # for MKS sh
+# Support unset when possible.
+if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
+  as_unset=unset
+else
+  as_unset=false
+fi
+# Work around bugs in pre-3.0 UWIN ksh.
+$as_unset ENV MAIL MAILPATH
+PS1='$ '
+PS2='> '
+PS4='+ '
+# NLS nuisances.
+for as_var in \
+  LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
+  LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
+  LC_TELEPHONE LC_TIME
+do
+  if (set +x; test -z "`(eval $as_var=C; export $as_var) 2>&1`"); then
+    eval $as_var=C; export $as_var
+  else
+    $as_unset $as_var
+  fi
+done
+# Required to use basename.
+if expr a : '\(a\)' >/dev/null 2>&1; then
+  as_expr=expr
+else
+  as_expr=false
+fi
+if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
+  as_basename=basename
+else
+  as_basename=false
+fi
+# Name of the executable.
+as_me=`$as_basename "$0" ||
+$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
+	 X"$0" : 'X\(//\)$' \| \
+	 X"$0" : 'X\(/\)$' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X/"$0" |
+    sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
+  	  /^X\/\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\/\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+# PATH needs CR, and LINENO needs CR and PATH.
+# Avoid depending upon Character Ranges.
+as_cr_letters='abcdefghijklmnopqrstuvwxyz'
+as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
+as_cr_Letters=$as_cr_letters$as_cr_LETTERS
+as_cr_digits='0123456789'
+as_cr_alnum=$as_cr_Letters$as_cr_digits
+# The user is always right.
+if test "${PATH_SEPARATOR+set}" != set; then
+  echo "#! /bin/sh" >conf$$.sh
+  echo  "exit 0"   >>conf$$.sh
+  chmod +x conf$$.sh
+  if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
+    PATH_SEPARATOR=';'
+  else
+    PATH_SEPARATOR=:
+  fi
+  rm -f conf$$.sh
+fi
+  as_lineno_1=$LINENO
+  as_lineno_2=$LINENO
+  as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
+  test "x$as_lineno_1" != "x$as_lineno_2" &&
+  test "x$as_lineno_3"  = "x$as_lineno_2"  || {
+  # Find who we are.  Look in the path if we contain no path at all
+  # relative or not.
+  case $0 in
+    *[\\/]* ) as_myself=$0 ;;
+    *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+  IFS=$as_save_IFS
+  test -z "$as_dir" && as_dir=.
+  test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+done
+       ;;
+  esac
+  # We did not find ourselves, most probably we were run as `sh COMMAND'
+  # in which case we are not to be found in the path.
+  if test "x$as_myself" = x; then
+    as_myself=$0
+  fi
+  if test ! -f "$as_myself"; then
+    { { echo "$as_me:$LINENO: error: cannot find myself; rerun with an absolute path" >&5
+echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2;}
+   { (exit 1); exit 1; }; }
+  fi
+  case $CONFIG_SHELL in
+  '')
+    as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
+do
+  IFS=$as_save_IFS
+  test -z "$as_dir" && as_dir=.
+  for as_base in sh bash ksh sh5; do
+	 case $as_dir in
+	 /*)
+	   if ("$as_dir/$as_base" -c '
+  as_lineno_1=$LINENO
+  as_lineno_2=$LINENO
+  as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
+  test "x$as_lineno_1" != "x$as_lineno_2" &&
+  test "x$as_lineno_3"  = "x$as_lineno_2" ') 2>/dev/null; then
+	     $as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
+	     $as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
+	     CONFIG_SHELL=$as_dir/$as_base
+	     export CONFIG_SHELL
+	     exec "$CONFIG_SHELL" "$0" ${1+"$@"}
+	   fi;;
+	 esac
+       done
+done
+;;
+  esac
+  # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
+  # uniformly replaced by the line number.  The first 'sed' inserts a
+  # line-number line before each line; the second 'sed' does the real
+  # work.  The second script uses 'N' to pair each line-number line
+  # with the numbered line, and appends trailing '-' during
+  # substitution so that $LINENO is not a special case at line end.
+  # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
+  # second 'sed' script.  Blame Lee E. McMahon for sed's syntax.  :-)
+  sed '=' <$as_myself |
+    sed '
+      N
+      s,$,-,
+      : loop
+      s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
+      t loop
+      s,-$,,
+      s,^['$as_cr_digits']*\n,,
+    ' >$as_me.lineno &&
+  chmod +x $as_me.lineno ||
+    { { echo "$as_me:$LINENO: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&5
+echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2;}
+   { (exit 1); exit 1; }; }
+  # Don't try to exec as it changes $[0], causing all sort of problems
+  # (the dirname of $[0] is not the place where we might find the
+  # original and so on.  Autoconf is especially sensible to this).
+  . ./$as_me.lineno
+  # Exit status is that of the last command.
+  exit
+}
+case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
+  *c*,-n*) ECHO_N= ECHO_C='
+' ECHO_T='	' ;;
+  *c*,*  ) ECHO_N=-n ECHO_C= ECHO_T= ;;
+  *)       ECHO_N= ECHO_C='\c' ECHO_T= ;;
+esac
+if expr a : '\(a\)' >/dev/null 2>&1; then
+  as_expr=expr
+else
+  as_expr=false
+fi
+rm -f conf$$ conf$$.exe conf$$.file
+echo >conf$$.file
+if ln -s conf$$.file conf$$ 2>/dev/null; then
+  # We could just check for DJGPP; but this test a) works b) is more generic
+  # and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
+  if test -f conf$$.exe; then
+    # Don't use ln at all; we don't have any links
+    as_ln_s='cp -p'
+  else
+    as_ln_s='ln -s'
+  fi
+elif ln conf$$.file conf$$ 2>/dev/null; then
+  as_ln_s=ln
+else
+  as_ln_s='cp -p'
+fi
+rm -f conf$$ conf$$.exe conf$$.file
+if mkdir -p . 2>/dev/null; then
+  as_mkdir_p=:
+else
+  test -d ./-p && rmdir ./-p
+  as_mkdir_p=false
+fi
+as_executable_p="test -f"
+# Sed expression to map a string onto a valid CPP name.
+as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
+# Sed expression to map a string onto a valid variable name.
+as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
+# IFS
+# We need space, tab and new line, in precisely that order.
+as_nl='
+'
+IFS=" 	$as_nl"
+# CDPATH.
+$as_unset CDPATH
+exec 6>&1
+# Open the log real soon, to keep \$[0] and so on meaningful, and to
+# report actual input values of CONFIG_FILES etc. instead of their
+# values after options handling.  Logging --version etc. is OK.
+exec 5>>config.log
+{
+  echo
+  sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
+## Running $as_me. ##
+_ASBOX
+} >&5
+cat >&5 <<_CSEOF
+This file was extended by $as_me, which was
+generated by GNU Autoconf 2.59.  Invocation command line was
+  CONFIG_FILES    = $CONFIG_FILES
+  CONFIG_HEADERS  = $CONFIG_HEADERS
+  CONFIG_LINKS    = $CONFIG_LINKS
+  CONFIG_COMMANDS = $CONFIG_COMMANDS
+  $ $0 $@
+_CSEOF
+echo "on `(hostname || uname -n) 2>/dev/null | sed 1q`" >&5
+echo >&5
+config_files=" Makefile doc/Makefile doc/man/Makefile bin/Makefile ext/lib/CompLearnLib/FoundComp.rb bin/ncd bin/ncdvector bin/ncdmatrix bin/labeltree bin/maketree bin/makesvm scripts/CompLearn.iss scripts/makeSetup.sh scripts/makedeb.zsh"
+config_headers=" ext/config.h"
+config_commands=" ext/Makefile"
+ac_cs_usage="\
+\`$as_me' instantiates files from templates according to the
+current configuration.
+Usage: $0 [OPTIONS] [FILE]...
+  -h, --help       print this help, then exit
+  -V, --version    print version number, then exit
+  -q, --quiet      do not print progress messages
+  -d, --debug      don't remove temporary files
+      --recheck    update $as_me by reconfiguring in the same conditions
+  --file=FILE[:TEMPLATE]
+		   instantiate the configuration file FILE
+  --header=FILE[:TEMPLATE]
+		   instantiate the configuration header FILE
+Configuration files:
+$config_files
+Configuration headers:
+$config_headers
+Configuration commands:
+$config_commands
+Report bugs to <[email protected]>."
+ac_cs_version="\
+config.status
+configured by ./configure, generated by GNU Autoconf 2.59,
+  with options \"\"
+Copyright (C) 2003 Free Software Foundation, Inc.
+This config.status script is free software; the Free Software Foundation
+gives unlimited permission to copy, distribute and modify it."
+srcdir=.
+INSTALL="/usr/bin/install -c"
+# If no file are specified by the user, then we need to provide default
+# value.  By we need to know if files were specified by the user.
+ac_need_defaults=:
+while test $# != 0
+do
+  case $1 in
+  --*=*)
+    ac_option=`expr "x$1" : 'x\([^=]*\)='`
+    ac_optarg=`expr "x$1" : 'x[^=]*=\(.*\)'`
+    ac_shift=:
+    ;;
+  -*)
+    ac_option=$1
+    ac_optarg=$2
+    ac_shift=shift
+    ;;
+  *) # This is not an option, so the user has probably given explicit
+     # arguments.
+     ac_option=$1
+     ac_need_defaults=false;;
+  esac
+  case $ac_option in
+  # Handling of the options.
+  -recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
+    ac_cs_recheck=: ;;
+  --version | --vers* | -V )
+    echo "$ac_cs_version"; exit 0 ;;
+  --he | --h)
+    # Conflict between --help and --header
+    { { echo "$as_me:$LINENO: error: ambiguous option: $1
+Try \`$0 --help' for more information." >&5
+echo "$as_me: error: ambiguous option: $1
+Try \`$0 --help' for more information." >&2;}
+   { (exit 1); exit 1; }; };;
+  --help | --hel | -h )
+    echo "$ac_cs_usage"; exit 0 ;;
+  --debug | --d* | -d )
+    debug=: ;;
+  --file | --fil | --fi | --f )
+    $ac_shift
+    CONFIG_FILES="$CONFIG_FILES $ac_optarg"
+    ac_need_defaults=false;;
+  --header | --heade | --head | --hea )
+    $ac_shift
+    CONFIG_HEADERS="$CONFIG_HEADERS $ac_optarg"
+    ac_need_defaults=false;;
+  -q | -quiet | --quiet | --quie | --qui | --qu | --q \
+  | -silent | --silent | --silen | --sile | --sil | --si | --s)
+    ac_cs_silent=: ;;
+  # This is an error.
+  -*) { { echo "$as_me:$LINENO: error: unrecognized option: $1
+Try \`$0 --help' for more information." >&5
+echo "$as_me: error: unrecognized option: $1
+Try \`$0 --help' for more information." >&2;}
+   { (exit 1); exit 1; }; } ;;
+  *) ac_config_targets="$ac_config_targets $1" ;;
+  esac
+  shift
+done
+ac_configure_extra_args=
+if $ac_cs_silent; then
+  exec 6>/dev/null
+  ac_configure_extra_args="$ac_configure_extra_args --silent"
+fi
+if $ac_cs_recheck; then
+  echo "running /bin/sh ./configure "  $ac_configure_extra_args " --no-create --no-recursion" >&6
+  exec /bin/sh ./configure  $ac_configure_extra_args --no-create --no-recursion
+fi
+#
+# INIT-COMMANDS section.
+#
+RUBYBIN=/usr/bin/ruby1.8
+for ac_config_target in $ac_config_targets
+do
+  case "$ac_config_target" in
+  # Handling of arguments.
+  "Makefile" ) CONFIG_FILES="$CONFIG_FILES Makefile" ;;
+  "doc/Makefile" ) CONFIG_FILES="$CONFIG_FILES doc/Makefile" ;;
+  "doc/man/Makefile" ) CONFIG_FILES="$CONFIG_FILES doc/man/Makefile" ;;
+  "bin/Makefile" ) CONFIG_FILES="$CONFIG_FILES bin/Makefile" ;;
+  "ext/lib/CompLearnLib/FoundComp.rb" ) CONFIG_FILES="$CONFIG_FILES ext/lib/CompLearnLib/FoundComp.rb" ;;
+  "bin/ncd" ) CONFIG_FILES="$CONFIG_FILES bin/ncd" ;;
+  "bin/ncdvector" ) CONFIG_FILES="$CONFIG_FILES bin/ncdvector" ;;
+  "bin/ncdmatrix" ) CONFIG_FILES="$CONFIG_FILES bin/ncdmatrix" ;;
+  "bin/labeltree" ) CONFIG_FILES="$CONFIG_FILES bin/labeltree" ;;
+  "bin/maketree" ) CONFIG_FILES="$CONFIG_FILES bin/maketree" ;;
+  "bin/makesvm" ) CONFIG_FILES="$CONFIG_FILES bin/makesvm" ;;
+  "scripts/CompLearn.iss" ) CONFIG_FILES="$CONFIG_FILES scripts/CompLearn.iss" ;;
+  "scripts/makeSetup.sh" ) CONFIG_FILES="$CONFIG_FILES scripts/makeSetup.sh" ;;
+  "scripts/makedeb.zsh" ) CONFIG_FILES="$CONFIG_FILES scripts/makedeb.zsh" ;;
+  "ext/Makefile" ) CONFIG_COMMANDS="$CONFIG_COMMANDS ext/Makefile" ;;
+  "ext/config.h" ) CONFIG_HEADERS="$CONFIG_HEADERS ext/config.h" ;;
+  *) { { echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
+echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
+   { (exit 1); exit 1; }; };;
+  esac
+done
+# If the user did not use the arguments to specify the items to instantiate,
+# then the envvar interface is used.  Set only those that are not.
+# We use the long form for the default assignment because of an extremely
+# bizarre bug on SunOS 4.1.3.
+if $ac_need_defaults; then
+  test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
+  test "${CONFIG_HEADERS+set}" = set || CONFIG_HEADERS=$config_headers
+  test "${CONFIG_COMMANDS+set}" = set || CONFIG_COMMANDS=$config_commands
+fi
+# Have a temporary directory for convenience.  Make it in the build tree
+# simply because there is no reason to put it here, and in addition,
+# creating and moving files from /tmp can sometimes cause problems.
+# Create a temporary directory, and hook for its removal unless debugging.
+$debug ||
+{
+  trap 'exit_status=$?; rm -rf $tmp && exit $exit_status' 0
+  trap '{ (exit 1); exit 1; }' 1 2 13 15
+}
+# Create a (secure) tmp directory for tmp files.
+{
+  tmp=`(umask 077 && mktemp -d -q "./confstatXXXXXX") 2>/dev/null` &&
+  test -n "$tmp" && test -d "$tmp"
+}  ||
+{
+  tmp=./confstat$$-$RANDOM
+  (umask 077 && mkdir $tmp)
+} ||
+{
+   echo "$me: cannot create a temporary directory in ." >&2
+   { (exit 1); exit 1; }
+}
+#
+# CONFIG_FILES section.
+#
+# No need to generate the scripts if there are no CONFIG_FILES.
+# This happens for instance when ./config.status config.h
+if test -n "$CONFIG_FILES"; then
+  # Protect against being on the right side of a sed subst in config.status.
+  sed 's/,@/@@/; s/@,/@@/; s/,;t t$/@;t t/; /@;t t$/s/[\\&,]/\\&/g;
+   s/@@/,@/; s/@@/@,/; s/@;t t$/,;t t/' >$tmp/subs.sed <<\CEOF
+s,@SHELL@,/bin/sh,;t t
+s,@PATH_SEPARATOR@,:,;t t
+s,@PACKAGE_NAME@,,;t t
+s,@PACKAGE_TARNAME@,,;t t
+s,@PACKAGE_VERSION@,,;t t
+s,@PACKAGE_STRING@,,;t t
+s,@PACKAGE_BUGREPORT@,,;t t
+s,@exec_prefix@,${prefix},;t t
+s,@prefix@,/usr/local,;t t
+s,@program_transform_name@,s,x,x,,;t t
+s,@bindir@,${exec_prefix}/bin,;t t
+s,@sbindir@,${exec_prefix}/sbin,;t t
+s,@libexecdir@,${exec_prefix}/libexec,;t t
+s,@datadir@,${prefix}/share,;t t
+s,@sysconfdir@,${prefix}/etc,;t t
+s,@sharedstatedir@,${prefix}/com,;t t
+s,@localstatedir@,${prefix}/var,;t t
+s,@libdir@,${exec_prefix}/lib,;t t
+s,@includedir@,${prefix}/include,;t t
+s,@oldincludedir@,/usr/include,;t t
+s,@infodir@,${prefix}/info,;t t
+s,@mandir@,${prefix}/man,;t t
+s,@build_alias@,,;t t
+s,@host_alias@,,;t t
+s,@target_alias@,,;t t
+s,@DEFS@,-DHAVE_CONFIG_H,;t t
+s,@ECHO_C@,,;t t
+s,@ECHO_N@,-n,;t t
+s,@ECHO_T@,,;t t
+s,@LIBS@,,;t t
+s,@SET_MAKE@,,;t t
+s,@TOPDIR@,/home/cilibrar/src/complearngem/complearn-0.6.2,;t t
+s,@INSTALL_PROGRAM@,${INSTALL},;t t
+s,@INSTALL_SCRIPT@,${INSTALL},;t t
+s,@INSTALL_DATA@,${INSTALL} -m 644,;t t
+s,@PACKAGE@,complearn,;t t
+s,@VERSION@,0.6.2,;t t
+s,@ACLOCAL@,aclocal,;t t
+s,@AUTOCONF@,autoconf,;t t
+s,@AUTOMAKE@,automake,;t t
+s,@AUTOHEADER@,autoheader,;t t
+s,@MAKEINFO@,makeinfo,;t t
+s,@RANLIB@,ranlib,;t t
+s,@ac_ct_RANLIB@,ranlib,;t t
+s,@WINBUILDDIR@,c:\build,;t t
+s,@CC@,gcc,;t t
+s,@CFLAGS@,-g -O2,;t t
+s,@LDFLAGS@,,;t t
+s,@CPPFLAGS@,,;t t
+s,@ac_ct_CC@,gcc,;t t
+s,@EXEEXT@,,;t t
+s,@OBJEXT@,o,;t t
+s,@RUBYBIN@,/usr/bin/ruby1.8,;t t
+s,@FOUNDBZIP2@,true,;t t
+s,@FOUNDGZIP@,true,;t t
+s,@CPP@,gcc -E,;t t
+s,@EGREP@,grep -E,;t t
+s,@LIBOBJS@,,;t t
+s,@LTLIBOBJS@,,;t t
+CEOF
+  # Split the substitutions into bite-sized pieces for seds with
+  # small command number limits, like on Digital OSF/1 and HP-UX.
+  ac_max_sed_lines=48
+  ac_sed_frag=1 # Number of current file.
+  ac_beg=1 # First line for current file.
+  ac_end=$ac_max_sed_lines # Line after last line for current file.
+  ac_more_lines=:
+  ac_sed_cmds=
+  while $ac_more_lines; do
+    if test $ac_beg -gt 1; then
+      sed "1,${ac_beg}d; ${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
+    else
+      sed "${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
+    fi
+    if test ! -s $tmp/subs.frag; then
+      ac_more_lines=false
+    else
+      # The purpose of the label and of the branching condition is to
+      # speed up the sed processing (if there are no `@' at all, there
+      # is no need to browse any of the substitutions).
+      # These are the two extra sed commands mentioned above.
+      (echo ':t
+  /@[a-zA-Z_][a-zA-Z_0-9]*@/!b' && cat $tmp/subs.frag) >$tmp/subs-$ac_sed_frag.sed
+      if test -z "$ac_sed_cmds"; then
+	ac_sed_cmds="sed -f $tmp/subs-$ac_sed_frag.sed"
+      else
+	ac_sed_cmds="$ac_sed_cmds | sed -f $tmp/subs-$ac_sed_frag.sed"
+      fi
+      ac_sed_frag=`expr $ac_sed_frag + 1`
+      ac_beg=$ac_end
+      ac_end=`expr $ac_end + $ac_max_sed_lines`
+    fi
+  done
+  if test -z "$ac_sed_cmds"; then
+    ac_sed_cmds=cat
+  fi
+fi # test -n "$CONFIG_FILES"
+for ac_file in : $CONFIG_FILES; do test "x$ac_file" = x: && continue
+  # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
+  case $ac_file in
+  - | *:- | *:-:* ) # input from stdin
+	cat >$tmp/stdin
+	ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
+	ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
+  *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
+	ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
+  * )   ac_file_in=$ac_file.in ;;
+  esac
+  # Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
+  ac_dir=`(dirname "$ac_file") 2>/dev/null ||
+$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$ac_file" : 'X\(//\)[^/]' \| \
+	 X"$ac_file" : 'X\(//\)$' \| \
+	 X"$ac_file" : 'X\(/\)' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X"$ac_file" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
+  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
+  	  /^X\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+  { if $as_mkdir_p; then
+    mkdir -p "$ac_dir"
+  else
+    as_dir="$ac_dir"
+    as_dirs=
+    while test ! -d "$as_dir"; do
+      as_dirs="$as_dir $as_dirs"
+      as_dir=`(dirname "$as_dir") 2>/dev/null ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$as_dir" : 'X\(//\)[^/]' \| \
+	 X"$as_dir" : 'X\(//\)$' \| \
+	 X"$as_dir" : 'X\(/\)' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X"$as_dir" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
+  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
+  	  /^X\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+    done
+    test ! -n "$as_dirs" || mkdir $as_dirs
+  fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
+echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
+   { (exit 1); exit 1; }; }; }
+  ac_builddir=.
+if test "$ac_dir" != .; then
+  ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
+  # A "../" for each directory in $ac_dir_suffix.
+  ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
+else
+  ac_dir_suffix= ac_top_builddir=
+fi
+case $srcdir in
+  .)  # No --srcdir option.  We are building in place.
+    ac_srcdir=.
+    if test -z "$ac_top_builddir"; then
+       ac_top_srcdir=.
+    else
+       ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
+    fi ;;
+  [\\/]* | ?:[\\/]* )  # Absolute path.
+    ac_srcdir=$srcdir$ac_dir_suffix;
+    ac_top_srcdir=$srcdir ;;
+  *) # Relative path.
+    ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
+    ac_top_srcdir=$ac_top_builddir$srcdir ;;
+esac
+# Do not use `cd foo && pwd` to compute absolute paths, because
+# the directories may not exist.
+case `pwd` in
+.) ac_abs_builddir="$ac_dir";;
+*)
+  case "$ac_dir" in
+  .) ac_abs_builddir=`pwd`;;
+  [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
+  *) ac_abs_builddir=`pwd`/"$ac_dir";;
+  esac;;
+esac
+case $ac_abs_builddir in
+.) ac_abs_top_builddir=${ac_top_builddir}.;;
+*)
+  case ${ac_top_builddir}. in
+  .) ac_abs_top_builddir=$ac_abs_builddir;;
+  [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
+  *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
+  esac;;
+esac
+case $ac_abs_builddir in
+.) ac_abs_srcdir=$ac_srcdir;;
+*)
+  case $ac_srcdir in
+  .) ac_abs_srcdir=$ac_abs_builddir;;
+  [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
+  *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
+  esac;;
+esac
+case $ac_abs_builddir in
+.) ac_abs_top_srcdir=$ac_top_srcdir;;
+*)
+  case $ac_top_srcdir in
+  .) ac_abs_top_srcdir=$ac_abs_builddir;;
+  [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
+  *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
+  esac;;
+esac
+  case $INSTALL in
+  [\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
+  *) ac_INSTALL=$ac_top_builddir$INSTALL ;;
+  esac
+  # Let's still pretend it is `configure' which instantiates (i.e., don't
+  # use $as_me), people would be surprised to read:
+  #    /* config.h.  Generated by config.status.  */
+  if test x"$ac_file" = x-; then
+    configure_input=
+  else
+    configure_input="$ac_file.  "
+  fi
+  configure_input=$configure_input"Generated from `echo $ac_file_in |
+				     sed 's,.*/,,'` by configure."
+  # First look for the input files in the build tree, otherwise in the
+  # src tree.
+  ac_file_inputs=`IFS=:
+    for f in $ac_file_in; do
+      case $f in
+      -) echo $tmp/stdin ;;
+      [\\/$]*)
+	 # Absolute (can't be DOS-style, as IFS=:)
+	 test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
+echo "$as_me: error: cannot find input file: $f" >&2;}
+   { (exit 1); exit 1; }; }
+	 echo "$f";;
+      *) # Relative
+	 if test -f "$f"; then
+	   # Build tree
+	   echo "$f"
+	 elif test -f "$srcdir/$f"; then
+	   # Source tree
+	   echo "$srcdir/$f"
+	 else
+	   # /dev/null tree
+	   { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
+echo "$as_me: error: cannot find input file: $f" >&2;}
+   { (exit 1); exit 1; }; }
+	 fi;;
+      esac
+    done` || { (exit 1); exit 1; }
+  if test x"$ac_file" != x-; then
+    { echo "$as_me:$LINENO: creating $ac_file" >&5
+echo "$as_me: creating $ac_file" >&6;}
+    rm -f "$ac_file"
+  fi
+  sed "/^[	 ]*VPATH[	 ]*=/{
+s/:*\$(srcdir):*/:/;
+s/:*\${srcdir}:*/:/;
+s/:*@srcdir@:*/:/;
+s/^\([^=]*=[	 ]*\):*/\1/;
+s/:*$//;
+s/^[^=]*=[	 ]*$//;
+}
+:t
+/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
+s,@configure_input@,$configure_input,;t t
+s,@srcdir@,$ac_srcdir,;t t
+s,@abs_srcdir@,$ac_abs_srcdir,;t t
+s,@top_srcdir@,$ac_top_srcdir,;t t
+s,@abs_top_srcdir@,$ac_abs_top_srcdir,;t t
+s,@builddir@,$ac_builddir,;t t
+s,@abs_builddir@,$ac_abs_builddir,;t t
+s,@top_builddir@,$ac_top_builddir,;t t
+s,@abs_top_builddir@,$ac_abs_top_builddir,;t t
+s,@INSTALL@,$ac_INSTALL,;t t
+" $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
+  rm -f $tmp/stdin
+  if test x"$ac_file" != x-; then
+    mv $tmp/out $ac_file
+  else
+    cat $tmp/out
+    rm -f $tmp/out
+  fi
+  # Run the commands associated with the file.
+  case $ac_file in
+    bin/ncd ) chmod +x bin/ncd ;;
+    bin/ncdvector ) chmod +x bin/ncdvector ;;
+    bin/ncdmatrix ) chmod +x bin/ncdmatrix ;;
+    bin/labeltree ) chmod +x bin/labeltree ;;
+    bin/maketree ) chmod +x bin/maketree ;;
+    bin/makesvm ) chmod +x bin/makesvm ;;
+    scripts/makeSetup.sh ) chmod +x scripts/makeSetup.sh ;;
+    scripts/makedeb.zsh ) chmod +x scripts/makedeb.zsh ;;
+  esac
+done
+#
+# CONFIG_HEADER section.
+#
+# These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
+# NAME is the cpp macro being defined and VALUE is the value it is being given.
+#
+# ac_d sets the value in "#define NAME VALUE" lines.
+ac_dA='s,^\([	 ]*\)#\([	 ]*define[	 ][	 ]*\)'
+ac_dB='[	 ].*$,\1#\2'
+ac_dC=' '
+ac_dD=',;t'
+# ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
+ac_uA='s,^\([	 ]*\)#\([	 ]*\)undef\([	 ][	 ]*\)'
+ac_uB='$,\1#\2define\3'
+ac_uC=' '
+ac_uD=',;t'
+for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
+  # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
+  case $ac_file in
+  - | *:- | *:-:* ) # input from stdin
+	cat >$tmp/stdin
+	ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
+	ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
+  *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
+	ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
+  * )   ac_file_in=$ac_file.in ;;
+  esac
+  test x"$ac_file" != x- && { echo "$as_me:$LINENO: creating $ac_file" >&5
+echo "$as_me: creating $ac_file" >&6;}
+  # First look for the input files in the build tree, otherwise in the
+  # src tree.
+  ac_file_inputs=`IFS=:
+    for f in $ac_file_in; do
+      case $f in
+      -) echo $tmp/stdin ;;
+      [\\/$]*)
+	 # Absolute (can't be DOS-style, as IFS=:)
+	 test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
+echo "$as_me: error: cannot find input file: $f" >&2;}
+   { (exit 1); exit 1; }; }
+	 # Do quote $f, to prevent DOS paths from being IFS'd.
+	 echo "$f";;
+      *) # Relative
+	 if test -f "$f"; then
+	   # Build tree
+	   echo "$f"
+	 elif test -f "$srcdir/$f"; then
+	   # Source tree
+	   echo "$srcdir/$f"
+	 else
+	   # /dev/null tree
+	   { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
+echo "$as_me: error: cannot find input file: $f" >&2;}
+   { (exit 1); exit 1; }; }
+	 fi;;
+      esac
+    done` || { (exit 1); exit 1; }
+  # Remove the trailing spaces.
+  sed 's/[	 ]*$//' $ac_file_inputs >$tmp/in
+  # Handle all the #define templates only if necessary.
+  if grep "^[	 ]*#[	 ]*define" $tmp/in >/dev/null; then
+  # If there are no defines, we may have an empty if/fi
+  :
+  cat >$tmp/defines.sed <<CEOF
+/^[	 ]*#[	 ]*define/!b
+t clr
+: clr
+${ac_dA}PACKAGE_NAME${ac_dB}PACKAGE_NAME${ac_dC}""${ac_dD}
+${ac_dA}PACKAGE_TARNAME${ac_dB}PACKAGE_TARNAME${ac_dC}""${ac_dD}
+${ac_dA}PACKAGE_VERSION${ac_dB}PACKAGE_VERSION${ac_dC}""${ac_dD}
+${ac_dA}PACKAGE_STRING${ac_dB}PACKAGE_STRING${ac_dC}""${ac_dD}
+${ac_dA}PACKAGE_BUGREPORT${ac_dB}PACKAGE_BUGREPORT${ac_dC}""${ac_dD}
+${ac_dA}PACKAGE${ac_dB}PACKAGE${ac_dC}"complearn"${ac_dD}
+${ac_dA}VERSION${ac_dB}VERSION${ac_dC}"0.6.2"${ac_dD}
+${ac_dA}STDC_HEADERS${ac_dB}STDC_HEADERS${ac_dC}1${ac_dD}
+${ac_dA}HAVE_SYS_TYPES_H${ac_dB}HAVE_SYS_TYPES_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_SYS_STAT_H${ac_dB}HAVE_SYS_STAT_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_STDLIB_H${ac_dB}HAVE_STDLIB_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_STRING_H${ac_dB}HAVE_STRING_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_MEMORY_H${ac_dB}HAVE_MEMORY_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_STRINGS_H${ac_dB}HAVE_STRINGS_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_INTTYPES_H${ac_dB}HAVE_INTTYPES_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_STDINT_H${ac_dB}HAVE_STDINT_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_UNISTD_H${ac_dB}HAVE_UNISTD_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_STDLIB_H${ac_dB}HAVE_STDLIB_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_SYS_TIME_H${ac_dB}HAVE_SYS_TIME_H${ac_dC}1${ac_dD}
+${ac_dA}HAVE_UNISTD_H${ac_dB}HAVE_UNISTD_H${ac_dC}1${ac_dD}
+CEOF
+  sed -f $tmp/defines.sed $tmp/in >$tmp/out
+  rm -f $tmp/in
+  mv $tmp/out $tmp/in
+  fi # grep
+  # Handle all the #undef templates
+  cat >$tmp/undefs.sed <<CEOF
+/^[	 ]*#[	 ]*undef/!b
+t clr
+: clr
+${ac_uA}PACKAGE_NAME${ac_uB}PACKAGE_NAME${ac_uC}""${ac_uD}
+${ac_uA}PACKAGE_TARNAME${ac_uB}PACKAGE_TARNAME${ac_uC}""${ac_uD}
+${ac_uA}PACKAGE_VERSION${ac_uB}PACKAGE_VERSION${ac_uC}""${ac_uD}
+${ac_uA}PACKAGE_STRING${ac_uB}PACKAGE_STRING${ac_uC}""${ac_uD}
+${ac_uA}PACKAGE_BUGREPORT${ac_uB}PACKAGE_BUGREPORT${ac_uC}""${ac_uD}
+${ac_uA}PACKAGE${ac_uB}PACKAGE${ac_uC}"complearn"${ac_uD}
+${ac_uA}VERSION${ac_uB}VERSION${ac_uC}"0.6.2"${ac_uD}
+${ac_uA}STDC_HEADERS${ac_uB}STDC_HEADERS${ac_uC}1${ac_uD}
+${ac_uA}HAVE_SYS_TYPES_H${ac_uB}HAVE_SYS_TYPES_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_SYS_STAT_H${ac_uB}HAVE_SYS_STAT_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_STDLIB_H${ac_uB}HAVE_STDLIB_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_STRING_H${ac_uB}HAVE_STRING_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_MEMORY_H${ac_uB}HAVE_MEMORY_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_STRINGS_H${ac_uB}HAVE_STRINGS_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_INTTYPES_H${ac_uB}HAVE_INTTYPES_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_STDINT_H${ac_uB}HAVE_STDINT_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_UNISTD_H${ac_uB}HAVE_UNISTD_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_STDLIB_H${ac_uB}HAVE_STDLIB_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_SYS_TIME_H${ac_uB}HAVE_SYS_TIME_H${ac_uC}1${ac_uD}
+${ac_uA}HAVE_UNISTD_H${ac_uB}HAVE_UNISTD_H${ac_uC}1${ac_uD}
+s,^[	 ]*#[	 ]*undef[	 ][	 ]*[a-zA-Z_][a-zA-Z_0-9]*,/* & */,
+CEOF
+  sed -f $tmp/undefs.sed $tmp/in >$tmp/out
+  rm -f $tmp/in
+  mv $tmp/out $tmp/in
+  # Let's still pretend it is `configure' which instantiates (i.e., don't
+  # use $as_me), people would be surprised to read:
+  #    /* config.h.  Generated by config.status.  */
+  if test x"$ac_file" = x-; then
+    echo "/* Generated by configure.  */" >$tmp/config.h
+  else
+    echo "/* $ac_file.  Generated by configure.  */" >$tmp/config.h
+  fi
+  cat $tmp/in >>$tmp/config.h
+  rm -f $tmp/in
+  if test x"$ac_file" != x-; then
+    if diff $ac_file $tmp/config.h >/dev/null 2>&1; then
+      { echo "$as_me:$LINENO: $ac_file is unchanged" >&5
+echo "$as_me: $ac_file is unchanged" >&6;}
+    else
+      ac_dir=`(dirname "$ac_file") 2>/dev/null ||
+$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$ac_file" : 'X\(//\)[^/]' \| \
+	 X"$ac_file" : 'X\(//\)$' \| \
+	 X"$ac_file" : 'X\(/\)' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X"$ac_file" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
+  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
+  	  /^X\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+      { if $as_mkdir_p; then
+    mkdir -p "$ac_dir"
+  else
+    as_dir="$ac_dir"
+    as_dirs=
+    while test ! -d "$as_dir"; do
+      as_dirs="$as_dir $as_dirs"
+      as_dir=`(dirname "$as_dir") 2>/dev/null ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$as_dir" : 'X\(//\)[^/]' \| \
+	 X"$as_dir" : 'X\(//\)$' \| \
+	 X"$as_dir" : 'X\(/\)' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X"$as_dir" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
+  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
+  	  /^X\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+    done
+    test ! -n "$as_dirs" || mkdir $as_dirs
+  fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
+echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
+   { (exit 1); exit 1; }; }; }
+      rm -f $ac_file
+      mv $tmp/config.h $ac_file
+    fi
+  else
+    cat $tmp/config.h
+    rm -f $tmp/config.h
+  fi
+done
+#
+# CONFIG_COMMANDS section.
+#
+for ac_file in : $CONFIG_COMMANDS; do test "x$ac_file" = x: && continue
+  ac_dest=`echo "$ac_file" | sed 's,:.*,,'`
+  ac_source=`echo "$ac_file" | sed 's,[^:]*:,,'`
+  ac_dir=`(dirname "$ac_dest") 2>/dev/null ||
+$as_expr X"$ac_dest" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$ac_dest" : 'X\(//\)[^/]' \| \
+	 X"$ac_dest" : 'X\(//\)$' \| \
+	 X"$ac_dest" : 'X\(/\)' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X"$ac_dest" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
+  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
+  	  /^X\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+  { if $as_mkdir_p; then
+    mkdir -p "$ac_dir"
+  else
+    as_dir="$ac_dir"
+    as_dirs=
+    while test ! -d "$as_dir"; do
+      as_dirs="$as_dir $as_dirs"
+      as_dir=`(dirname "$as_dir") 2>/dev/null ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+	 X"$as_dir" : 'X\(//\)[^/]' \| \
+	 X"$as_dir" : 'X\(//\)$' \| \
+	 X"$as_dir" : 'X\(/\)' \| \
+	 .     : '\(.\)' 2>/dev/null ||
+echo X"$as_dir" |
+    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
+  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
+  	  /^X\(\/\/\)$/{ s//\1/; q; }
+  	  /^X\(\/\).*/{ s//\1/; q; }
+  	  s/.*/./; q'`
+    done
+    test ! -n "$as_dirs" || mkdir $as_dirs
+  fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
+echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
+   { (exit 1); exit 1; }; }; }
+  ac_builddir=.
+if test "$ac_dir" != .; then
+  ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
+  # A "../" for each directory in $ac_dir_suffix.
+  ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
+else
+  ac_dir_suffix= ac_top_builddir=
+fi
+case $srcdir in
+  .)  # No --srcdir option.  We are building in place.
+    ac_srcdir=.
+    if test -z "$ac_top_builddir"; then
+       ac_top_srcdir=.
+    else
+       ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
+    fi ;;
+  [\\/]* | ?:[\\/]* )  # Absolute path.
+    ac_srcdir=$srcdir$ac_dir_suffix;
+    ac_top_srcdir=$srcdir ;;
+  *) # Relative path.
+    ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
+    ac_top_srcdir=$ac_top_builddir$srcdir ;;
+esac
+# Do not use `cd foo && pwd` to compute absolute paths, because
+# the directories may not exist.
+case `pwd` in
+.) ac_abs_builddir="$ac_dir";;
+*)
+  case "$ac_dir" in
+  .) ac_abs_builddir=`pwd`;;
+  [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
+  *) ac_abs_builddir=`pwd`/"$ac_dir";;
+  esac;;
+esac
+case $ac_abs_builddir in
+.) ac_abs_top_builddir=${ac_top_builddir}.;;
+*)
+  case ${ac_top_builddir}. in
+  .) ac_abs_top_builddir=$ac_abs_builddir;;
+  [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
+  *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
+  esac;;
+esac
+case $ac_abs_builddir in
+.) ac_abs_srcdir=$ac_srcdir;;
+*)
+  case $ac_srcdir in
+  .) ac_abs_srcdir=$ac_abs_builddir;;
+  [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
+  *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
+  esac;;
+esac
+case $ac_abs_builddir in
+.) ac_abs_top_srcdir=$ac_top_srcdir;;
+*)
+  case $ac_top_srcdir in
+  .) ac_abs_top_srcdir=$ac_abs_builddir;;
+  [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
+  *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
+  esac;;
+esac
+  { echo "$as_me:$LINENO: executing $ac_dest commands" >&5
+echo "$as_me: executing $ac_dest commands" >&6;}
+  case $ac_dest in
+    ext/Makefile ) cd $srcdir/ext ; $RUBYBIN extconf.rb ; echo 'distdir:' >> Makefile  ;;
+  esac
+done
+{ (exit 0); exit 0; }